ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: homeobox C6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197757 HOXC6 9606 + 12:53990624-54030823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243108 HOXC6-001 54028358-54030823 protein_coding
  ENST00000394331 HOXC6-002 54015897-54030733 protein_coding
  ENST00000504315 HOXC6-003 53990624-54028922 protein_coding
  ENST00000509328 HOXC6-004 53994944-54029689 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHUVECENST00000243108ENST00000394331
Transcript ID BECs HAoEC HUVEC
ENST00000243108 1.016±0.00 0.064±0.03 0.788±0.53
ENST00000394331 N/A N/A 0.247±0.16

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009B4 CIL_0009B4_0001 VISTA
CIL_0007SU CIL_0007SU_0001 VISTA
CIL_00084M CIL_00084M_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007275 TAS multicellular organismal development
GO:0009952 IEA anterior/posterior pattern specification
GO:0043565 IEA sequence-specific DNA binding
GO:0048706 IEA embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070343 hoxc6a protein_coding Danio_rerio
ENSMUSG00000001661 Hoxc6 protein_coding Mus_musculus

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