ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001661 Hoxc6 10090 + 15:102998257-103011881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001711 Hoxc6-001 103009573-103011881 protein_coding
  ENSMUST00000173210 Hoxc6-002 102998257-103010768 processed_transcript
  ENSMUST00000173421 Hoxc6-003 103000529-103010006 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000001711ENSMUST00000173210ENSMUST00000173421
Transcript ID C166 Tie2+ EC mES
ENSMUST00000001711 0.032±0.02 0.111±0.00 0.143±0.05
ENSMUST00000173210 N/A N/A 0.075±0.00
ENSMUST00000173421 N/A 0.100±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007SU CIL_0007SU_0002 VISTA
CIL_00084M CIL_00084M_0002 VISTA
CIL_00049I CIL_00049I_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009952 IGI anterior/posterior pattern specification
GO:0043565 IEA sequence-specific DNA binding
GO:0048706 IGI embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070343 hoxc6a protein_coding Danio_rerio
ENSG00000197757 HOXC6 homeobox C6 protein_coding Homo_sapiens

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