ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213782 DDX47 9606 + 12:12813316-12829981 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352940 DDX47-002 12813316-12829979 protein_coding
  ENST00000358007 DDX47-001 12813346-12829981 protein_coding
  ENST00000392155 DDX47-010 12820348-12821337 processed_transcript
  ENST00000426619 DDX47-007 12813346-12821969 retained_intron
  ENST00000535722 DDX47-012 12824385-12826292 retained_intron
  ENST00000541537 DDX47-003 12813316-12825107 retained_intron
  ENST00000542123 DDX47-006 12813358-12829981 retained_intron
  ENST00000542832 DDX47-011 12820277-12823259 processed_transcript
  ENST00000544032 DDX47-004 12813346-12822048 retained_intron
  ENST00000544400 DDX47-009 12813360-12824567 protein_coding
  ENST00000544497 DDX47-008 12813355-12814658 retained_intron
  ENST00000545038 DDX47-005 12813354-12829979 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000352940ENST00000358007ENST00000426619ENST00000541537ENST00000542123ENST00000545038
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000352940 5.787±0.00 N/A N/A N/A N/A
ENST00000358007 25.105±0.00 31.308±4.79 23.853±0.00 28.191±0.00 25.696±12.18
ENST00000426619 N/A N/A N/A N/A 27.060±0.00
ENST00000541537 N/A N/A N/A N/A 2.091±0.00
ENST00000542123 N/A N/A N/A N/A 1.942±0.25
ENST00000545038 N/A N/A N/A N/A 21.799±22.97

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000KD CIL_0000KD_0001 CGP
CIL_0003H5 CIL_0003H5_0001 CGP
CIL_0003H4 CIL_0003H4_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005730 IDA nucleolus
GO:0006200 IEA ATP catabolic process
GO:0006364 IMP rRNA processing
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IMP RNA splicing
GO:0008625 IDA extrinsic apoptotic signaling pathway via death domain receptors
GO:0016020 IDA membrane
GO:0016787 IEA hydrolase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030204 Ddx47 protein_coding Mus_musculus

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