ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030204 Ddx47 10090 + 6:135011612-135023776 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032326 Ddx47-001 135011612-135023776 protein_coding
  ENSMUST00000123022 Ddx47-006 135015351-135019066 processed_transcript
  ENSMUST00000130851 Ddx47-003 135011622-135019037 protein_coding
  ENSMUST00000131719 Ddx47-005 135011626-135016628 processed_transcript
  ENSMUST00000134549 Ddx47-007 135015822-135018533 retained_intron
  ENSMUST00000154558 Ddx47-010 135011653-135021578 protein_coding
  ENSMUST00000155022 Ddx47-008 135019000-135021178 retained_intron
  ENSMUST00000155277 Ddx47-002 135011632-135023772 retained_intron
  ENSMUST00000155698 Ddx47-004 135011635-135015626 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000032326ENSMUST00000155277
Transcript ID C166 Tie2+ EC mES
ENSMUST00000032326 47.894±3.58 17.699±12.02 13.469±2.40
ENSMUST00000155277 2.571±0.00 N/A 0.870±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003H5 CIL_0003H5_0002 CGP
CIL_0003H4 CIL_0003H4_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005730 ISS nucleolus
GO:0006200 IEA ATP catabolic process
GO:0006364 ISS rRNA processing
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 ISS RNA splicing
GO:0008625 ISS extrinsic apoptotic signaling pathway via death domain receptors
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000213782 DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 protein_coding Homo_sapiens

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