ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: vacuolar protein sorting 16 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000215305 VPS16 9606 + 20:2840703-2866732 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380443 VPS16-006 2862457-2866732 protein_coding
  ENST00000380445 VPS16-001 2840703-2866732 protein_coding
  ENST00000380469 VPS16-003 2840703-2866732 protein_coding
  ENST00000417508 VPS16-004 2840763-2862093 protein_coding
  ENST00000453689 VPS16-005 2840760-2864082 protein_coding
  ENST00000466415 VPS16-007 2865911-2866732 processed_transcript
  ENST00000481812 VPS16-008 2860970-2864230 processed_transcript
  ENST00000487461 VPS16-002 2863371-2865038 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000380443ENST00000380445ENST00000380469ENST00000466415
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000380443 8.403±1.53 N/A 13.977±0.00 N/A 13.418±1.55
ENST00000380445 7.567±0.00 15.764±5.61 5.010±0.00 12.391±0.00 13.094±7.34
ENST00000380469 N/A N/A 5.878±0.00 N/A 9.024±5.44
ENST00000466415 25.118±1.90 N/A 23.403±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007SG CIL_0007SG_0001 VISTA
CIL_00006D CIL_00006D_0001 CGP
CIL_00012E CIL_00012E_0001 CGP
CIL_00006B CIL_00006B_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005768 IEA endosome
GO:0005769 IDA early endosome
GO:0005770 IDA late endosome
GO:0005884 IEA actin filament
GO:0006886 IEA intracellular protein transport
GO:0030424 IEA axon
GO:0030897 IDA HOPS complex
GO:0043025 IEA neuronal cell body
GO:0046718 IEA viral entry into host cell
GO:0051015 IEA actin filament binding
GO:0055037 IDA recycling endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059902 vps16 protein_coding Danio_rerio
ENSMUSG00000027411 Vps16 protein_coding Mus_musculus

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