ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000244509 APOBEC3C 9606 + 22:39014083-39020352 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361441 APOBEC3C-001 39014083-39020352 protein_coding
  ENST00000428892 APOBEC3C-002 39014262-39018926 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000361441ENST00000428892
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000361441 2.052±0.36 12.154±8.46 9.265±0.00 6.402±4.92
ENST00000428892 N/A 2.567±0.00 3.754±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0009972 IDA cytidine deamination
GO:0010529 IDA negative regulation of transposition
GO:0016032 IEA viral process
GO:0016814 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
GO:0044822 IDA poly(A) RNA binding
GO:0045071 IDA negative regulation of viral genome replication
GO:0045087 IEA innate immune response
GO:0051607 IEA defense response to virus
GO:0080111 IDA DNA demethylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000009585 Apobec3 protein_coding Mus_musculus

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