ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001027 Scn4a 10090 - 11:106318592-106353288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021056 Scn4a-001 106318592-106349389 protein_coding
  ENSMUST00000174877 Scn4a-002 106349455-106353288 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000021056
Transcript ID C166 Tie2+ EC mES
ENSMUST00000021056 0.020±0.01 0.032±0.03 0.035±0.03

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009B9 CIL_0009B9_0002 VISTA
CIL_0006Q8 CIL_0006Q8_0002 CGP
CIL_0002P3 CIL_0002P3_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001518 IC voltage-gated sodium channel complex
GO:0005248 IDA voltage-gated sodium channel activity
GO:0005886 IBA plasma membrane
GO:0006814 IDA sodium ion transport
GO:0019228 IBA neuronal action potential
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034588 scn4ab protein_coding Danio_rerio
ENSG00000007314 SCN4A sodium channel, voltage-gated, type IV, alpha subunit protein_coding Homo_sapiens

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