ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002963 Pnkp 10090 + 7:44857139-44862992 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003044 Pnkp-001 44857159-44862992 protein_coding
  ENSMUST00000098478 Pnkp-004 44857342-44862649 protein_coding
  ENSMUST00000107876 Pnkp-002 44857139-44862650 protein_coding
  ENSMUST00000123015 Pnkp-005 44857348-44862650 nonsense_mediated_decay
  ENSMUST00000124168 Pnkp-009 44857340-44861351 nonsense_mediated_decay
  ENSMUST00000126860 Pnkp-011 44859689-44862648 retained_intron
  ENSMUST00000139003 Pnkp-008 44857173-44860424 nonsense_mediated_decay
  ENSMUST00000144669 Pnkp-012 44861697-44862670 retained_intron
  ENSMUST00000145850 Pnkp-003 44857167-44862656 retained_intron
  ENSMUST00000152747 Pnkp-010 44860423-44861369 retained_intron
  ENSMUST00000154968 Pnkp-006 44857151-44857505 protein_coding
  ENSMUST00000155050 Pnkp-007 44857379-44862641 nonsense_mediated_decay
  ENSMUST00000200892 Pnkp-015 44861514-44862648 protein_coding
  ENSMUST00000201882 Pnkp-013 44857394-44862650 nonsense_mediated_decay
  ENSMUST00000202646 Pnkp-014 44861375-44862650 non_stop_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000003044ENSMUST00000098478ENSMUST00000107876ENSMUST00000123015ENSMUST00000126860ENSMUST00000139003ENSMUST00000152747ENSMUST00000200892
Transcript ID C166 Tie2+ EC mES
ENSMUST00000003044 2.779±0.45 4.310±3.12 5.474±0.09
ENSMUST00000098478 2.183±0.46 3.940±0.00 N/A
ENSMUST00000107876 1.584±0.34 11.951±2.06 3.207±0.00
ENSMUST00000123015 1.123±0.00 N/A N/A
ENSMUST00000126860 N/A 1.290±0.24 5.526±1.46
ENSMUST00000139003 2.443±0.00 N/A N/A
ENSMUST00000152747 N/A 0.410±0.00 N/A
ENSMUST00000200892 N/A 4.215±0.89 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0006281 IEA DNA repair
GO:0006979 IEA response to oxidative stress
GO:0016020 IEA membrane
GO:0016311 IEA dephosphorylation
GO:0019201 IEA nucleotide kinase activity
GO:0042769 IEA DNA damage response, detection of DNA damage
GO:0046403 IEA polynucleotide 3'-phosphatase activity
GO:0046404 IEA ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0046939 IEA nucleotide phosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000039650 PNKP polynucleotide kinase 3'-phosphatase protein_coding Homo_sapiens

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