ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004319 Clcn3 10090 - 8:60910389-60983300 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004430 Clcn3-002 60911923-60983239 protein_coding
  ENSMUST00000056508 Clcn3-003 60910389-60955233 protein_coding
  ENSMUST00000093490 Clcn3-001 60910389-60983300 protein_coding
  ENSMUST00000110301 Clcn3-004 60911923-60983239 protein_coding
  ENSMUST00000110302 Clcn3-006 60911896-60954748 protein_coding
  ENSMUST00000129672 Clcn3-010 60911923-60955233 retained_intron
  ENSMUST00000132234 Clcn3-009 60928295-60954779 retained_intron
  ENSMUST00000145493 Clcn3-007 60938640-60983286 retained_intron
  ENSMUST00000145741 Clcn3-005 60910861-60922960 processed_transcript
  ENSMUST00000147824 Clcn3-008 60935357-60983244 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000093490ENSMUST00000110301ENSMUST00000110302ENSMUST00000129672
Transcript ID C166 Tie2+ EC mES
ENSMUST00000093490 5.203±1.39 7.557±5.98 3.955±2.29
ENSMUST00000110301 2.836±0.54 1.841±0.14 N/A
ENSMUST00000110302 3.195±0.51 1.348±0.00 N/A
ENSMUST00000129672 N/A N/A 0.741±0.28

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005254 IEA chloride channel activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005622 IEA intracellular
GO:0005769 IEA early endosome
GO:0005770 IEA late endosome
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0006821 IEA chloride transport
GO:0012506 IEA vesicle membrane
GO:0015297 IEA antiporter activity
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0030165 IEA PDZ domain binding
GO:0030554 IEA adenyl nucleotide binding
GO:0031410 IEA cytoplasmic vesicle
GO:0031902 TAS late endosome membrane
GO:0034220 IEA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0046982 IEA protein heterodimerization activity
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003269 clcn3 protein_coding Danio_rerio
ENSG00000109572 CLCN3 chloride channel, voltage-sensitive 3 protein_coding Homo_sapiens

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