ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009905 Kdsr 10090 - 1:106720459-106759727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000010049 Kdsr-001 106720459-106759727 protein_coding
  ENSMUST00000187319 Kdsr-002 106747500-106759699 retained_intron
  ENSMUST00000187617 Kdsr-003 106757102-106759683 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000010049ENSMUST00000187319
Transcript ID C166 Tie2+ EC mES
ENSMUST00000010049 5.753±0.65 2.839±1.29 2.360±0.52
ENSMUST00000187319 8.210±0.85 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000B4 CIL_0000B4_0003 CGP
CIL_0000B7 CIL_0000B7_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 ISO endoplasmic reticulum
GO:0006666 ISO 3-keto-sphinganine metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030148 IGI sphingolipid biosynthetic process
GO:0047560 ISO 3-dehydrosphinganine reductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012021 kdsr protein_coding Danio_rerio
ENSG00000119537 KDSR 3-ketodihydrosphingosine reductase protein_coding Homo_sapiens

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