ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017119 Nbr1 10090 + 11:101552149-101581951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071537 Nbr1-201 101556172-101581012 protein_coding
  ENSMUST00000103098 Nbr1-002 101552654-101581951 protein_coding
  ENSMUST00000103099 Nbr1-001 101552149-101581951 protein_coding
  ENSMUST00000107208 Nbr1-005 101552858-101581951 protein_coding
  ENSMUST00000107212 Nbr1-015 101552882-101581951 protein_coding
  ENSMUST00000107213 Nbr1-003 101552858-101581951 protein_coding
  ENSMUST00000107218 Nbr1-202 101556058-101581012 protein_coding
  ENSMUST00000123558 Nbr1-004 101552858-101581951 nonsense_mediated_decay
  ENSMUST00000127421 Nbr1-016 101552901-101559545 protein_coding
  ENSMUST00000127871 Nbr1-009 101566033-101568446 retained_intron
  ENSMUST00000136185 Nbr1-007 101555866-101559562 nonsense_mediated_decay
  ENSMUST00000141170 Nbr1-013 101577824-101580788 retained_intron
  ENSMUST00000144517 Nbr1-011 101568687-101569412 processed_transcript
  ENSMUST00000146452 Nbr1-008 101561786-101565781 retained_intron
  ENSMUST00000147239 Nbr1-014 101552234-101559546 protein_coding
  ENSMUST00000148805 Nbr1-012 101575107-101576631 retained_intron
  ENSMUST00000149019 Nbr1-006 101567119-101581951 protein_coding
  ENSMUST00000149170 Nbr1-010 101552867-101568540 processed_transcript
  ENSMUST00000172744 Nbr1-018 101572227-101575216 retained_intron
  ENSMUST00000174013 Nbr1-017 101568294-101569403 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000103099ENSMUST00000107208ENSMUST00000107213ENSMUST00000123558ENSMUST00000149019
Transcript ID C166 Tie2+ EC mES
ENSMUST00000103099 4.185±0.00 N/A N/A
ENSMUST00000107208 11.058±1.68 5.795±0.24 6.545±0.63
ENSMUST00000107213 20.193±3.44 8.899±4.93 15.712±2.95
ENSMUST00000123558 6.755±1.30 5.478±0.46 N/A
ENSMUST00000149019 6.936±0.00 N/A 16.510±7.62

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00040M CIL_00040M_0002 CGP
CIL_000996 CIL_000996_0002 VISTA
CIL_00090X CIL_00090X_0002 VISTA
CIL_0000KX CIL_0000KX_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005770 IDA late endosome
GO:0005776 IDA autophagic vacuole
GO:0005829 ISS cytosol
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016236 ISS macroautophagy
GO:0030500 IMP regulation of bone mineralization
GO:0031410 IEA cytoplasmic vesicle
GO:0032872 IMP regulation of stress-activated MAPK cascade
GO:0043130 ISS ubiquitin binding
GO:0045668 IMP negative regulation of osteoblast differentiation
GO:0051019 IDA mitogen-activated protein kinase binding
GO:0051259 ISS protein oligomerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077297 nbr1 protein_coding Danio_rerio
ENSDARG00000078772 NBR1 (2 of 2) protein_coding Danio_rerio
ENSG00000188554 NBR1 neighbor of BRCA1 gene 1 protein_coding Homo_sapiens

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