ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018920 Cxcl16 10090 - 11:70453983-70459984 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019064 Cxcl16-001 70453983-70459984 protein_coding
  ENSMUST00000126391 Cxcl16-002 70454238-70459408 nonsense_mediated_decay
  ENSMUST00000154475 Cxcl16-004 70455190-70459832 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000019064ENSMUST00000126391
Transcript ID C166 Tie2+ EC mES
ENSMUST00000019064 13.623±4.37 0.502±0.08 0.129±0.00
ENSMUST00000126391 22.574±7.31 2.584±1.65 0.371±0.19

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001RD CIL_0001RD_0002 CGP
CIL_0001RE CIL_0001RE_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005041 IDA low-density lipoprotein receptor activity
GO:0005044 IDA scavenger receptor activity
GO:0005615 IDA extracellular space
GO:0006898 IEA receptor-mediated endocytosis
GO:0008009 IDA chemokine activity
GO:0010818 IDA T cell chemotaxis
GO:0016021 IDA integral component of membrane
GO:0030307 IEA positive regulation of cell growth
GO:0030335 IEA positive regulation of cell migration
GO:0034097 IEA response to cytokine
GO:0034341 IEA response to interferon-gamma
GO:0034612 IEA response to tumor necrosis factor
GO:0048247 IEA lymphocyte chemotaxis
GO:0071222 IDA cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000161921 CXCL16 chemokine (C-X-C motif) ligand 16 protein_coding Homo_sapiens

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