ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019558 Slc6a8 10090 + X:73673150-73682502 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033752 Slc6a8-001 73673150-73682502 protein_coding
  ENSMUST00000114464 Slc6a8-004 73676846-73682502 nonsense_mediated_decay
  ENSMUST00000114465 Slc6a8-002 73673785-73682502 protein_coding
  ENSMUST00000114467 Slc6a8-201 73673242-73681640 protein_coding
  ENSMUST00000146796 Slc6a8-011 73673919-73677325 retained_intron
  ENSMUST00000164449 Slc6a8-006 73673707-73681291 protein_coding
  ENSMUST00000166200 Slc6a8-010 73678878-73679999 processed_transcript
  ENSMUST00000167828 Slc6a8-014 73678893-73680002 retained_intron
  ENSMUST00000168764 Slc6a8-013 73677059-73679768 retained_intron
  ENSMUST00000168831 Slc6a8-003 73673958-73681289 protein_coding
  ENSMUST00000170574 Slc6a8-015 73678893-73679915 retained_intron
  ENSMUST00000170614 Slc6a8-009 73678154-73681100 retained_intron
  ENSMUST00000171398 Slc6a8-012 73675507-73677344 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000033752ENSMUST00000114464ENSMUST00000114465ENSMUST00000114467ENSMUST00000168831
Transcript ID C166 Tie2+ EC mES
ENSMUST00000033752 7.143±0.51 N/A 1.442±0.18
ENSMUST00000114464 7.815±0.49 2.458±0.42 7.638±2.76
ENSMUST00000114465 8.294±2.68 3.711±2.50 2.271±0.36
ENSMUST00000114467 9.711±0.78 N/A N/A
ENSMUST00000168831 5.762±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001UY CIL_0001UY_0002 CGP
CIL_0001UX CIL_0001UX_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005308 IEA creatine transmembrane transporter activity
GO:0005309 IEA creatine:sodium symporter activity
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005887 IEA integral component of plasma membrane
GO:0006814 IEA sodium ion transport
GO:0006836 IEA neurotransmitter transport
GO:0015220 IEA choline transmembrane transporter activity
GO:0015871 IEA choline transport
GO:0015881 IEA creatine transport
GO:1902598 IEA creatine transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043646 slc6a8 protein_coding Danio_rerio
ENSG00000130821 SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 protein_coding Homo_sapiens
ENSG00000273554 AC136616.1 protein_coding Homo_sapiens

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