ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020486 Sept4 10090 + 11:87568903-87590539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018544 Sept4-001 87581041-87590539 protein_coding
  ENSMUST00000063156 Sept4-003 87581061-87590375 protein_coding
  ENSMUST00000107960 Sept4-005 87581061-87590539 protein_coding
  ENSMUST00000107961 Sept4-013 87578928-87589274 protein_coding
  ENSMUST00000107962 Sept4-002 87578401-87590539 protein_coding
  ENSMUST00000122067 Sept4-009 87578424-87590537 protein_coding
  ENSMUST00000122945 Sept4-011 87568903-87585241 protein_coding
  ENSMUST00000123081 Sept4-017 87578456-87586031 retained_intron
  ENSMUST00000127414 Sept4-015 87588868-87589994 retained_intron
  ENSMUST00000132723 Sept4-004 87578447-87590539 retained_intron
  ENSMUST00000133202 Sept4-010 87582209-87589041 protein_coding
  ENSMUST00000133638 Sept4-018 87578470-87590539 retained_intron
  ENSMUST00000134923 Sept4-007 87581074-87590539 retained_intron
  ENSMUST00000135175 Sept4-012 87578484-87585859 retained_intron
  ENSMUST00000136229 Sept4-006 87581069-87586031 retained_intron
  ENSMUST00000140398 Sept4-008 87578412-87589186 retained_intron
  ENSMUST00000143950 Sept4-016 87589477-87590539 processed_transcript
  ENSMUST00000148216 Sept4-014 87585225-87589864 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000063156ENSMUST00000107962ENSMUST00000122067ENSMUST00000133638ENSMUST00000140398ENSMUST00000143950
Transcript ID C166 Tie2+ EC mES
ENSMUST00000063156 15.251±0.29 N/A N/A
ENSMUST00000107962 10.599±0.00 71.945±3.82 0.243±0.00
ENSMUST00000122067 19.134±3.38 97.231±6.13 0.525±0.00
ENSMUST00000133638 N/A 1.061±0.00 0.144±0.00
ENSMUST00000140398 N/A N/A 0.213±0.00
ENSMUST00000143950 N/A 9.642±0.00 0.532±0.15

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0007049 IEA cell cycle
GO:0007286 IMP spermatid development
GO:0007420 IMP brain development
GO:0030382 IMP sperm mitochondrion organization
GO:0031105 IEA septin complex
GO:0031398 IEA positive regulation of protein ubiquitination
GO:0031514 IMP motile cilium
GO:0036126 IDA sperm flagellum
GO:0042995 IDA cell projection
GO:0043065 IEA positive regulation of apoptotic process
GO:0048240 IMP sperm capacitation
GO:0051301 IEA cell division
GO:0097227 IDA sperm annulus
GO:2001244 IEA positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010385 sept4a protein_coding Danio_rerio
ENSG00000108387 SEPT4 septin 4 protein_coding Homo_sapiens

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