ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020781 Tsen54 10090 + 11:115814724-115823094 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021134 Tsen54-001 115814724-115823094 protein_coding
  ENSMUST00000106481 Tsen54-002 115814724-115823094 protein_coding
  ENSMUST00000128266 Tsen54-004 115814805-115820507 retained_intron
  ENSMUST00000129765 Tsen54-006 115814746-115815545 retained_intron
  ENSMUST00000136343 Tsen54-005 115815698-115821699 protein_coding
  ENSMUST00000141748 Tsen54-003 115814771-115820528 retained_intron
  ENSMUST00000154304 Tsen54-007 115820710-115823089 protein_coding
  ENSMUST00000157061 Tsen54-008 115820846-115822269 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000021134ENSMUST00000106481ENSMUST00000154304
Transcript ID C166 Tie2+ EC mES
ENSMUST00000021134 8.447±0.38 2.206±1.78 3.933±0.63
ENSMUST00000106481 N/A 0.265±0.00 N/A
ENSMUST00000154304 N/A 1.530±0.00 6.122±3.05

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008PW CIL_0008PW_0002 VISTA
CIL_0007IY CIL_0007IY_0002 CGP
CIL_0007IP CIL_0007IP_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006388 IEA tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036844 tsen54 protein_coding Danio_rerio
ENSG00000182173 TSEN54 TSEN54 tRNA splicing endonuclease subunit protein_coding Homo_sapiens

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