ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020829 Slc46a1 10090 + 11:78465697-78472059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001126 Slc46a1-001 78465697-78471945 protein_coding
  ENSMUST00000146431 Slc46a1-002 78465750-78471622 nonsense_mediated_decay
  ENSMUST00000180786 Slc46a1-003 78470226-78472059 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000001126ENSMUST00000146431ENSMUST00000180786
Transcript ID C166 Tie2+ EC mES
ENSMUST00000001126 8.112±1.11 0.459±0.31 0.880±0.45
ENSMUST00000146431 5.025±1.50 0.334±0.10 0.559±0.00
ENSMUST00000180786 N/A 0.034±0.00 0.314±0.15

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003LU CIL_0003LU_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005542 IEA folic acid binding
GO:0005737 IDA cytoplasm
GO:0008517 ISS folic acid transporter activity
GO:0009986 IEA cell surface
GO:0015232 IDA heme transporter activity
GO:0015350 IEA methotrexate transporter activity
GO:0015884 ISS folic acid transport
GO:0015886 IDA heme transport
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0031526 IEA brush border membrane
GO:0051958 IEA methotrexate transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026149 slc46a1 protein_coding Danio_rerio
ENSG00000076351 SLC46A1 solute carrier family 46 (folate transporter), member 1 protein_coding Homo_sapiens

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