ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020952 Scfd1 10090 + 12:51377580-51450096 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021335 Scfd1-201 51377580-51450096 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000021335
Transcript ID C166 Tie2+ EC mES
ENSMUST00000021335 21.304±2.28 11.048±4.66 10.219±0.61

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000893 CIL_000893_0002 VISTA
CIL_0007KV CIL_0007KV_0003 UCNEbase
CIL_0003SX CIL_0003SX_0002 CGP
CIL_0003T0 CIL_0003T0_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 ISS cell morphogenesis
GO:0001666 IEA response to hypoxia
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005798 IEA Golgi-associated vesicle
GO:0005801 IEA cis-Golgi network
GO:0005886 IEA plasma membrane
GO:0006890 IEA retrograde vesicle-mediated transport, Golgi to ER
GO:0006892 IEA post-Golgi vesicle-mediated transport
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0006909 ISS phagocytosis
GO:0009636 IEA response to toxic substance
GO:0015031 IEA protein transport
GO:0017119 IEA Golgi transport complex
GO:0019905 IEA syntaxin binding
GO:0031201 ISS SNARE complex
GO:0047485 IEA protein N-terminus binding
GO:0060628 IEA regulation of ER to Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000779 scfd1 protein_coding Danio_rerio
ENSG00000092108 SCFD1 sec1 family domain containing 1 protein_coding Homo_sapiens

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