ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021775 Nr1d2 10090 - 14:18204054-18239127 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090543 Nr1d2-001 18204054-18239127 protein_coding
  ENSMUST00000143308 Nr1d2-002 18214536-18239031 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000090543ENSMUST00000143308
Transcript ID C166 Tie2+ EC mES
ENSMUST00000090543 8.371±2.82 9.139±7.86 0.534±0.33
ENSMUST00000143308 N/A 0.365±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001046 IDA core promoter sequence-specific DNA binding
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004887 IEA thyroid hormone receptor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0019216 IMP regulation of lipid metabolic process
GO:0030522 IEA intracellular receptor signaling pathway
GO:0042752 IDA regulation of circadian rhythm
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0048511 IEA rhythmic process
GO:0050727 IMP regulation of inflammatory response
GO:0055088 IMP lipid homeostasis
GO:2000505 IMP regulation of energy homeostasis
GO:2001014 IMP regulation of skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003820 nr1d2a protein_coding Danio_rerio
ENSDARG00000009594 nr1d2b protein_coding Danio_rerio
ENSG00000174738 NR1D2 nuclear receptor subfamily 1, group D, member 2 protein_coding Homo_sapiens

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