ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022019 Tdrd3 10090 + 14:87416639-87545373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000163714 Tdrd3-005 87471907-87486338 protein_coding
  ENSMUST00000168275 Tdrd3-003 87416639-87545360 protein_coding
  ENSMUST00000169504 Tdrd3-002 87416639-87514766 protein_coding
  ENSMUST00000170712 Tdrd3-004 87457081-87480836 protein_coding
  ENSMUST00000170865 Tdrd3-001 87416666-87545373 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000168275ENSMUST00000169504ENSMUST00000170865
Transcript ID C166 Tie2+ EC mES
ENSMUST00000168275 1.819±0.38 3.086±1.60 1.615±0.36
ENSMUST00000169504 1.174±0.18 2.437±0.21 0.746±0.36
ENSMUST00000170865 N/A 1.413±0.00 1.688±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000MG CIL_0000MG_0002 CGP
CIL_0005KQ CIL_0005KQ_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0003713 ISS transcription coactivator activity
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0016568 IEA chromatin modification
GO:0035064 ISS methylated histone binding
GO:0035145 ISS exon-exon junction complex
GO:0044822 IEA poly(A) RNA binding
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025421 tdrd3 protein_coding Danio_rerio
ENSG00000083544 TDRD3 tudor domain containing 3 protein_coding Homo_sapiens

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