ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022945 Chaf1b 10090 + 16:93883901-93906115 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023666 Chaf1b-001 93883901-93906115 protein_coding
  ENSMUST00000117099 Chaf1b-003 93883924-93906077 protein_coding
  ENSMUST00000120586 Chaf1b-005 93884202-93887152 protein_coding
  ENSMUST00000124313 Chaf1b-002 93883931-93894288 retained_intron
  ENSMUST00000128316 Chaf1b-007 93904693-93906110 retained_intron
  ENSMUST00000142316 Chaf1b-004 93884016-93885471 protein_coding
  ENSMUST00000143006 Chaf1b-006 93892741-93900129 retained_intron
  ENSMUST00000152980 Chaf1b-008 93886710-93892789 processed_transcript

Mus musculus Ensembl GRCm38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000023666ENSMUST00000117099ENSMUST00000124313ENSMUST00000128316
Transcript ID C166 Tie2+ EC mES
ENSMUST00000023666 33.893±2.16 6.001±3.33 14.928±3.20
ENSMUST00000117099 5.409±0.35 1.264±0.00 N/A
ENSMUST00000124313 N/A 0.512±0.00 N/A
ENSMUST00000128316 N/A N/A 8.145±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006Z5 CIL_0006Z5_0002 CGP
CIL_0006Z6 CIL_0006Z6_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 IEA nucleoplasm
GO:0005829 IEA cytosol
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006335 IEA DNA replication-dependent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0031497 ISS chromatin assembly
GO:0033186 ISS CAF-1 complex
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056473 chaf1b protein_coding Danio_rerio
ENSG00000159259 CHAF1B chromatin assembly factor 1, subunit B (p60) protein_coding Homo_sapiens

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