ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023032 Slc4a8 10090 + 15:100761747-100823968 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023776 Slc4a8-001 100761747-100823968 protein_coding
  ENSMUST00000160256 Slc4a8-003 100761888-100774963 retained_intron
  ENSMUST00000161564 Slc4a8-004 100761869-100775084 nonsense_mediated_decay
  ENSMUST00000162049 Slc4a8-002 100781254-100815935 protein_coding
  ENSMUST00000162483 Slc4a8-006 100812189-100816030 processed_transcript
  ENSMUST00000162744 Slc4a8-007 100814354-100815800 retained_intron
  ENSMUST00000162805 Slc4a8-005 100802748-100806289 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000023776ENSMUST00000162049ENSMUST00000162483
Transcript ID C166 Tie2+ EC mES
ENSMUST00000023776 0.083±0.02 0.014±0.00 0.049±0.01
ENSMUST00000162049 0.784±0.17 0.031±0.02 0.165±0.06
ENSMUST00000162483 N/A N/A 0.493±0.08

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006JV CIL_0006JV_0002 CGP
CIL_0006JW CIL_0006JW_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005452 IEA inorganic anion exchanger activity
GO:0005886 IDA plasma membrane
GO:0006814 IEA sodium ion transport
GO:0006820 IEA anion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0032809 IDA neuronal cell body membrane
GO:0043005 IDA neuron projection
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015531 slc4a8 protein_coding Danio_rerio
ENSG00000050438 SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 protein_coding Homo_sapiens

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