ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023079 Gtf2ird1 10090 - 5:134357656-134456716 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073161 Gtf2ird1-013 134357661-134456688 protein_coding
  ENSMUST00000074114 Gtf2ird1-012 134358573-134456576 protein_coding
  ENSMUST00000100650 Gtf2ird1-006 134358654-134456586 protein_coding
  ENSMUST00000100652 Gtf2ird1-002 134358635-134456692 protein_coding
  ENSMUST00000100654 Gtf2ird1-007 134357679-134456584 protein_coding
  ENSMUST00000111244 Gtf2ird1-009 134357656-134456256 protein_coding
  ENSMUST00000111245 Gtf2ird1-004 134357697-134456589 protein_coding
  ENSMUST00000167084 Gtf2ird1-201 134357669-134456716 protein_coding
  ENSMUST00000171794 Gtf2ird1-001 134357656-134456716 protein_coding
  ENSMUST00000200798 Gtf2ird1-019 134382583-134395796 nonsense_mediated_decay
  ENSMUST00000200817 Gtf2ird1-027 134382792-134384502 retained_intron
  ENSMUST00000200944 Gtf2ird1-011 134357679-134456576 protein_coding
  ENSMUST00000201441 Gtf2ird1-021 134382583-134395796 protein_coding
  ENSMUST00000201447 Gtf2ird1-022 134383779-134395796 protein_coding
  ENSMUST00000201495 Gtf2ird1-024 134363954-134388482 nonsense_mediated_decay
  ENSMUST00000201526 Gtf2ird1-020 134382795-134395796 nonsense_mediated_decay
  ENSMUST00000201608 Gtf2ird1-030 134360175-134361140 retained_intron
  ENSMUST00000201647 Gtf2ird1-016 134411077-134455951 protein_coding
  ENSMUST00000201704 Gtf2ird1-017 134390842-134415256 protein_coding
  ENSMUST00000202104 Gtf2ird1-029 134357663-134363276 protein_coding
  ENSMUST00000202165 Gtf2ird1-025 134363334-134388461 protein_coding
  ENSMUST00000202202 Gtf2ird1-018 134384936-134402188 retained_intron
  ENSMUST00000202268 Gtf2ird1-028 134362404-134377078 retained_intron
  ENSMUST00000202280 Gtf2ird1-010 134357679-134456576 protein_coding
  ENSMUST00000202321 Gtf2ird1-026 134360238-134385071 nonsense_mediated_decay
  ENSMUST00000202334 Gtf2ird1-023 134384820-134395700 retained_intron
  ENSMUST00000202335 Gtf2ird1-008 134375474-134456277 retained_intron
  ENSMUST00000202414 Gtf2ird1-003 134402903-134456679 retained_intron
  ENSMUST00000202554 Gtf2ird1-005 134358573-134456589 protein_coding
  ENSMUST00000202763 Gtf2ird1-015 134404796-134456674 processed_transcript
  ENSMUST00000202829 Gtf2ird1-014 134357786-134377024 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000073161ENSMUST00000074114ENSMUST00000111244ENSMUST00000167084ENSMUST00000171794ENSMUST00000202280ENSMUST00000202414
Transcript ID C166 Tie2+ EC mES
ENSMUST00000073161 N/A 2.513±0.00 N/A
ENSMUST00000074114 N/A 1.538±0.72 N/A
ENSMUST00000111244 3.915±0.68 1.048±0.47 N/A
ENSMUST00000167084 4.018±0.23 N/A N/A
ENSMUST00000171794 8.674±3.57 4.418±1.57 7.202±2.65
ENSMUST00000202280 4.898±0.54 N/A N/A
ENSMUST00000202414 N/A 0.813±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0014886 IDA transition between slow and fast fiber

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022203 gtf2ird1 protein_coding Danio_rerio
ENSG00000006704 GTF2IRD1 GTF2I repeat domain containing 1 protein_coding Homo_sapiens

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