ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024565 Sall3 10090 - 18:80966376-80986578 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057950 Sall3-201 80966376-80986578 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000057950
Transcript ID Tie2+ EC mES
ENSMUST00000057950 0.030±0.02 4.306±2.37

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008HP CIL_0008HP_0002 VISTA
CIL_0008IX CIL_0008IX_0002 VISTA
CIL_0008KF CIL_0008KF_0002 VISTA
CIL_0007MA CIL_0007MA_0004 UCNEbase
CIL_00094I CIL_00094I_0002 VISTA
CIL_0008XA CIL_0008XA_0002 VISTA
CIL_0007YX CIL_0007YX_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0021891 IMP olfactory bulb interneuron development
GO:0035136 IGI forelimb morphogenesis
GO:0035137 IGI hindlimb morphogenesis
GO:0045879 IGI negative regulation of smoothened signaling pathway
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057586 sall3b protein_coding Danio_rerio
ENSDARG00000079613 sall3a protein_coding Danio_rerio
ENSG00000256463 SALL3 spalt-like transcription factor 3 protein_coding Homo_sapiens

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