ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024613 Tcof1 10090 - 18:60813755-60848971 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000163446 Tcof1-003 60815997-60848959 nonsense_mediated_decay
  ENSMUST00000175934 Tcof1-005 60813755-60848929 protein_coding
  ENSMUST00000176088 Tcof1-008 60828067-60829027 retained_intron
  ENSMUST00000176630 Tcof1-001 60813755-60848971 protein_coding
  ENSMUST00000177172 Tcof1-004 60818030-60848918 protein_coding
  ENSMUST00000177343 Tcof1-007 60838683-60848446 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000175934ENSMUST00000176630
Transcript ID C166 Tie2+ EC mES
ENSMUST00000175934 7.120±1.04 0.916±0.35 8.984±0.58
ENSMUST00000176630 4.478±0.60 3.174±1.45 7.062±1.10

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00091Q CIL_00091Q_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006810 IEA transport
GO:0042790 IMP transcription of nuclear large rRNA transcript from RNA polymerase I promoter
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000070814 TCOF1 Treacher Collins-Franceschetti syndrome 1 protein_coding Homo_sapiens

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