ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024942 Capn1 10090 - 19:5988546-6015825 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025891 Capn1-201 5988546-6015247 protein_coding
  ENSMUST00000164843 Capn1-202 5988546-6015825 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000025891ENSMUST00000164843
Transcript ID C166 Tie2+ EC mES
ENSMUST00000025891 25.192±2.24 0.850±0.05 1.329±0.00
ENSMUST00000164843 9.108±3.05 4.108±0.46 2.101±0.91

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008W1 CIL_0008W1_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 TAS calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IBA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0006508 ISS proteolysis
GO:0016020 IEA membrane
GO:0032801 IDA receptor catabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045199 CAPN1 (1 of 2) protein_coding Danio_rerio
ENSDARG00000055338 CAPN1 (2 of 2) protein_coding Danio_rerio
ENSG00000014216 CAPN1 calpain 1, (mu/I) large subunit protein_coding Homo_sapiens

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