ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025034 Trim8 10090 + 19:46501648-46516444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026008 Trim8-201 46501648-46516444 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000026008
Transcript ID C166 Tie2+ EC mES
ENSMUST00000026008 50.802±9.12 9.671±3.37 18.635±2.62

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008MQ CIL_0008MQ_0002 VISTA
CIL_00065X CIL_00065X_0002 CGP
CIL_0001HP CIL_0001HP_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 NAS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016605 IEA PML body
GO:0016874 IEA ligase activity
GO:0032897 IDA negative regulation of viral transcription
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045087 IDA innate immune response
GO:0046597 IDA negative regulation of viral entry into host cell
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity
GO:1902187 IDA negative regulation of viral release from host cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060729 trim8b protein_coding Danio_rerio
ENSDARG00000090512 trim8a protein_coding Danio_rerio
ENSG00000171206 TRIM8 tripartite motif containing 8 protein_coding Homo_sapiens

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