ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025730 Rab40c 10090 - 17:25882114-25919727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026826 Rab40c-201 25882114-25919714 protein_coding
  ENSMUST00000164738 Rab40c-006 25885082-25919711 protein_coding
  ENSMUST00000164982 Rab40c-004 25883628-25919506 protein_coding
  ENSMUST00000166146 Rab40c-003 25882114-25919556 nonsense_mediated_decay
  ENSMUST00000166619 Rab40c-002 25882117-25913632 processed_transcript
  ENSMUST00000167018 Rab40c-005 25883639-25919727 protein_coding
  ENSMUST00000167626 Rab40c-001 25882114-25919652 protein_coding
  ENSMUST00000172168 Rab40c-007 25884763-25919690 processed_transcript
  ENSMUST00000179998 Rab40c-202 25882114-25919642 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000026826ENSMUST00000166619
Transcript ID C166 Tie2+ EC mES
ENSMUST00000026826 7.651±0.52 12.016±0.00 7.669±0.91
ENSMUST00000166619 11.140±1.74 7.058±3.37 5.895±0.58

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016567 IEA protein ubiquitination
GO:0019003 IEA GDP binding
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061208 rab40c protein_coding Danio_rerio
ENSG00000197562 RAB40C RAB40C, member RAS oncogene family protein_coding Homo_sapiens

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