ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025747 Tyms 10090 - 5:30058202-30073617 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026846 Tyms-001 30058827-30073617 protein_coding
  ENSMUST00000134298 Tyms-006 30063846-30073586 retained_intron
  ENSMUST00000138520 Tyms-005 30067891-30073522 processed_transcript
  ENSMUST00000141630 Tyms-002 30058202-30073581 nonsense_mediated_decay
  ENSMUST00000146520 Tyms-010 30063236-30073552 nonsense_mediated_decay
  ENSMUST00000154751 Tyms-003 30061064-30073614 retained_intron
  ENSMUST00000196095 Tyms-009 30061131-30073569 nonsense_mediated_decay
  ENSMUST00000196872 Tyms-007 30061980-30073581 protein_coding
  ENSMUST00000198095 Tyms-008 30064103-30073576 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000026846ENSMUST00000134298ENSMUST00000141630ENSMUST00000146520ENSMUST00000154751ENSMUST00000196095
Transcript ID C166 Tie2+ EC mES
ENSMUST00000026846 8.040±2.37 3.304±2.18 9.612±1.06
ENSMUST00000134298 N/A 5.189±0.32 N/A
ENSMUST00000141630 N/A 0.520±0.00 1.931±0.00
ENSMUST00000146520 34.991±10.62 22.573±29.80 26.940±3.83
ENSMUST00000154751 N/A 4.000±0.00 N/A
ENSMUST00000196095 28.943±7.52 24.423±19.36 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IEA mRNA binding
GO:0004799 IEA thymidylate synthase activity
GO:0005542 IEA folic acid binding
GO:0005634 ISS nucleus
GO:0005730 IEA nucleolus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005759 ISS mitochondrial matrix
GO:0006206 IEA pyrimidine nucleobase metabolic process
GO:0006231 IEA dTMP biosynthetic process
GO:0006235 IEA dTTP biosynthetic process
GO:0007568 IEA aging
GO:0007623 IEA circadian rhythm
GO:0008144 IEA drug binding
GO:0009636 IEA response to toxic substance
GO:0014070 IEA response to organic cyclic compound
GO:0019088 IEA immortalization of host cell by virus
GO:0019860 IEA uracil metabolic process
GO:0031100 IEA organ regeneration
GO:0032259 IEA methylation
GO:0032570 IEA response to progesterone
GO:0033189 IEA response to vitamin A
GO:0034097 IEA response to cytokine
GO:0042493 IEA response to drug
GO:0042803 IEA protein homodimerization activity
GO:0045471 IEA response to ethanol
GO:0046078 IEA dUMP metabolic process
GO:0046653 IEA tetrahydrofolate metabolic process
GO:0046683 IEA response to organophosphorus
GO:0048037 IEA cofactor binding
GO:0048589 IEA developmental growth
GO:0051216 IEA cartilage development
GO:0051384 IEA response to glucocorticoid
GO:0051593 IEA response to folic acid
GO:0060574 IEA intestinal epithelial cell maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042894 tyms protein_coding Danio_rerio
ENSG00000176890 TYMS thymidylate synthetase protein_coding Homo_sapiens

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