ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026027 Stradb 10090 + 1:58973522-58995715 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027185 Stradb-001 58973522-58995715 protein_coding
  ENSMUST00000114296 Stradb-004 58973522-58991512 protein_coding
  ENSMUST00000123301 Stradb-002 58973522-58994997 nonsense_mediated_decay
  ENSMUST00000123965 Stradb-006 58973522-58981475 retained_intron
  ENSMUST00000147637 Stradb-005 58973522-58987847 retained_intron
  ENSMUST00000152318 Stradb-008 58991058-58994359 protein_coding
  ENSMUST00000153990 Stradb-003 58973522-58995122 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027185ENSMUST00000114296ENSMUST00000123301ENSMUST00000123965ENSMUST00000147637ENSMUST00000153990
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027185 1.374±0.39 0.594±0.33 0.930±0.49
ENSMUST00000114296 N/A 2.049±0.46 N/A
ENSMUST00000123301 5.358±0.42 1.615±0.92 1.005±0.26
ENSMUST00000123965 N/A 0.281±0.00 N/A
ENSMUST00000147637 N/A 0.144±0.00 N/A
ENSMUST00000153990 2.472±0.57 0.404±0.16 0.803±0.41

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00089O CIL_00089O_0002 VISTA
CIL_0000JJ CIL_0000JJ_0003 CGP
CIL_00020Q CIL_00020Q_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IDA cell morphogenesis
GO:0004672 IDA protein kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006611 ISS protein export from nucleus
GO:0007010 TAS cytoskeleton organization
GO:0007049 IEA cell cycle
GO:0007254 IDA JNK cascade
GO:0032147 ISS activation of protein kinase activity
GO:2001240 IDA negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088225 STRADB protein_coding Danio_rerio
ENSG00000082146 STRADB STE20-related kinase adaptor beta protein_coding Homo_sapiens

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