ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123301 Stradb-002 ENSMUSG00000026027 10090 + 1:58973522-58994997 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000123301
Transcript ID C166 Tie2+ EC mES
ENSMUST00000123301 5.358±0.42 1.615±0.92 1.005±0.26

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IDA cell morphogenesis
GO:0004672 IDA protein kinase activity
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006611 ISS protein export from nucleus
GO:0007010 TAS cytoskeleton organization
GO:0007049 IEA cell cycle
GO:0007254 IDA JNK cascade
GO:0032147 ISS activation of protein kinase activity
GO:2001240 IDA negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000194530 STRADB-001 protein_coding Homo_sapiens 0 813
ENST00000392249 STRADB-003 protein_coding Homo_sapiens 0 813
ENST00000412769 RP11-329A14.1-001 processed_pseudogene Homo_sapiens 0 640
ENST00000415688 STRADB-009 protein_coding Homo_sapiens 0 390
ENST00000447698 STRADB-005 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000458269 STRADB-006 protein_coding Homo_sapiens 0 496
ENST00000465990 SPATA6-009 processed_transcript Homo_sapiens 6e-30 134
ENST00000466770 STRADB-010 retained_intron Homo_sapiens 0 335
ENST00000468123 STRADB-008 retained_intron Homo_sapiens 3e-37 159
ENST00000478954 STRADBP1-001 processed_pseudogene Homo_sapiens 0 592
ENST00000484098 STRADB-011 retained_intron Homo_sapiens 0 497
ENST00000498648 STRADB-007 retained_intron Homo_sapiens 0 333

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