ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026034 Clk1 10090 - 1:58410189-58424066 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034868 Clk1-001 58412000-58424066 protein_coding
  ENSMUST00000123580 Clk1-006 58412000-58416765 retained_intron
  ENSMUST00000129303 Clk1-009 58412316-58413825 processed_transcript
  ENSMUST00000129577 Clk1-003 58416143-58424066 retained_intron
  ENSMUST00000131051 Clk1-012 58416910-58417426 retained_intron
  ENSMUST00000135380 Clk1-008 58414615-58421258 retained_intron
  ENSMUST00000139787 Clk1-011 58412000-58412861 processed_transcript
  ENSMUST00000141570 Clk1-010 58412000-58413437 processed_transcript
  ENSMUST00000147258 Clk1-007 58421626-58424066 retained_intron
  ENSMUST00000148330 Clk1-004 58412000-58424066 nonsense_mediated_decay
  ENSMUST00000151338 Clk1-005 58412000-58424066 nonsense_mediated_decay
  ENSMUST00000156931 Clk1-002 58410189-58424066 retained_intron
  ENSMUST00000186552 Clk1-013 58414590-58420398 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000034868ENSMUST00000123580ENSMUST00000129577ENSMUST00000139787ENSMUST00000147258ENSMUST00000148330ENSMUST00000151338ENSMUST00000156931
Transcript ID C166 Tie2+ EC mES
ENSMUST00000034868 26.206±3.75 63.819±45.19 9.462±2.75
ENSMUST00000123580 N/A 34.103±0.00 4.540±1.22
ENSMUST00000129577 5.523±1.33 22.966±12.91 N/A
ENSMUST00000139787 N/A N/A 30.841±0.00
ENSMUST00000147258 N/A 163.716±0.00 N/A
ENSMUST00000148330 19.056±5.59 16.495±0.00 10.881±3.39
ENSMUST00000151338 N/A N/A 10.429±0.45
ENSMUST00000156931 N/A N/A 2.386±0.44

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002AX CIL_0002AX_0002 CGP
CIL_0002AY CIL_0002AY_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004712 IEA protein serine/threonine/tyrosine kinase activity
GO:0004713 IDA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0018108 IDA peptidyl-tyrosine phosphorylation
GO:0043484 IEA regulation of RNA splicing
GO:0046777 IDA protein autophosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005908 clk4b protein_coding Danio_rerio
ENSDARG00000089372 clk4a protein_coding Danio_rerio
ENSG00000013441 CLK1 CDC-like kinase 1 protein_coding Homo_sapiens

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