ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026098 Pms1 10090 - 1:53189187-53297018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027267 Pms1-001 53189187-53297018 protein_coding
  ENSMUST00000126412 Pms1-005 53281947-53297015 protein_coding
  ENSMUST00000126590 Pms1-004 53275143-53297015 protein_coding
  ENSMUST00000128337 Pms1-006 53267863-53296975 protein_coding
  ENSMUST00000133358 Pms1-007 53275121-53282408 protein_coding
  ENSMUST00000135246 Pms1-002 53197112-53297017 protein_coding
  ENSMUST00000142922 Pms1-003 53262895-53296967 processed_transcript
  ENSMUST00000188890 Pms1-008 53295293-53297015 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027267ENSMUST00000135246ENSMUST00000142922
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027267 3.323±0.47 0.426±0.18 1.463±0.08
ENSMUST00000135246 N/A 0.388±0.29 0.770±0.00
ENSMUST00000142922 N/A 0.128±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001W3 CIL_0001W3_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003697 IBA single-stranded DNA binding
GO:0005524 IEA ATP binding
GO:0006200 IBA ATP catabolic process
GO:0006298 IMP mismatch repair
GO:0016887 IBA ATPase activity
GO:0030983 IEA mismatched DNA binding
GO:0032389 IBA MutLalpha complex
GO:0042493 IEA response to drug

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000476 pms1 protein_coding Danio_rerio
ENSG00000064933 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) protein_coding Homo_sapiens

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