ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027267 Pms1-001 ENSMUSG00000026098 10090 - 1:53189187-53297018 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027267
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027267 3.323±0.47 0.426±0.18 1.463±0.08

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003697 IBA single-stranded DNA binding
GO:0005524 IEA ATP binding
GO:0006200 IBA ATP catabolic process
GO:0006298 IMP mismatch repair
GO:0016887 IBA ATPase activity
GO:0030983 IEA mismatched DNA binding
GO:0032389 IBA MutLalpha complex
GO:0042493 IEA response to drug

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342075 PMS1-005 nonsense_mediated_decay Homo_sapiens 0 1812
ENST00000374826 PMS1-007 protein_coding Homo_sapiens 0 470
ENST00000409593 PMS1-011 protein_coding Homo_sapiens 0 647
ENST00000409823 PMS1-003 protein_coding Homo_sapiens 0 1552
ENST00000409985 PMS1-004 protein_coding Homo_sapiens 0 473
ENST00000418224 PMS1-201 protein_coding Homo_sapiens 0 797
ENST00000420421 PMS1-015 protein_coding Homo_sapiens 0 248
ENST00000421722 PMS1-012 processed_transcript Homo_sapiens 0 647
ENST00000424059 PMS1-009 processed_transcript Homo_sapiens 0 797
ENST00000424307 PMS1-006 protein_coding Homo_sapiens 0 1380
ENST00000424766 PMS1-014 protein_coding Homo_sapiens 0 612
ENST00000432292 PMS1-202 protein_coding Homo_sapiens 0 1810
ENST00000441310 PMS1-001 protein_coding Homo_sapiens 0 2276
ENST00000447232 PMS1-010 protein_coding Homo_sapiens 0 1363
ENST00000447734 PMS1-008 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000450931 PMS1-002 nonsense_mediated_decay Homo_sapiens 0 797
ENST00000452382 PMS1-016 protein_coding Homo_sapiens 0 717
ENST00000483293 PMS1-017 processed_transcript Homo_sapiens 0 531
ENST00000618056 PMS1-203 protein_coding Homo_sapiens 0 612
ENST00000624204 PMS1-204 protein_coding Homo_sapiens 0 1812

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