ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027940 Tpm3 10090 + 3:90072649-90100902 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029549 Tpm3-003 90079540-90100901 protein_coding
  ENSMUST00000062193 Tpm3-201 90072651-90100901 protein_coding
  ENSMUST00000118566 Tpm3-004 90079654-90100896 protein_coding
  ENSMUST00000119158 Tpm3-005 90079715-90098783 protein_coding
  ENSMUST00000119570 Tpm3-001 90072651-90100902 protein_coding
  ENSMUST00000121503 Tpm3-002 90072649-90092130 protein_coding
  ENSMUST00000127955 Tpm3-008 90080442-90087485 protein_coding
  ENSMUST00000131354 Tpm3-006 90079665-90089596 retained_intron
  ENSMUST00000133281 Tpm3-010 90087309-90089807 retained_intron
  ENSMUST00000133361 Tpm3-013 90087456-90088569 retained_intron
  ENSMUST00000136125 Tpm3-016 90090059-90098783 processed_transcript
  ENSMUST00000143281 Tpm3-015 90089631-90090472 retained_intron
  ENSMUST00000147430 Tpm3-011 90079665-90087877 retained_intron
  ENSMUST00000149115 Tpm3-009 90086371-90087547 retained_intron
  ENSMUST00000149432 Tpm3-007 90079891-90089077 protein_coding
  ENSMUST00000149734 Tpm3-014 90088061-90090042 retained_intron
  ENSMUST00000151798 Tpm3-012 90087439-90087915 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000029549ENSMUST00000131354ENSMUST00000133361ENSMUST00000147430ENSMUST00000149734
Transcript ID C166 Tie2+ EC mES
ENSMUST00000029549 56.659±4.70 29.701±12.20 52.112±17.46
ENSMUST00000131354 N/A 8.956±0.00 N/A
ENSMUST00000133361 N/A 163.059±90.14 N/A
ENSMUST00000147430 52.291±4.91 N/A N/A
ENSMUST00000149734 N/A 37.752±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001725 ISO stress fiber
GO:0002102 IDA podosome
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0030426 IDA growth cone
GO:0030863 IDA cortical cytoskeleton
GO:0031941 IDA filamentous actin
GO:0032154 IDA cleavage furrow
GO:0043005 IDA neuron projection
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005162 tpm3 protein_coding Danio_rerio
ENSG00000143549 TPM3 tropomyosin 3 protein_coding Homo_sapiens

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