ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028330 Ncbp1 10090 + 4:46138613-46172403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030014 Ncbp1-001 46138613-46172403 protein_coding
  ENSMUST00000131187 Ncbp1-003 46157901-46160099 processed_transcript
  ENSMUST00000133286 Ncbp1-002 46165196-46171979 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000030014
Transcript ID C166 Tie2+ EC mES
ENSMUST00000030014 42.684±3.10 17.796±9.01 7.184±0.93

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002JE CIL_0002JE_0002 CGP
CIL_0009AQ CIL_0009AQ_0002 VISTA
CIL_000853 CIL_000853_0002 VISTA
CIL_0009AR CIL_0009AR_0002 VISTA
CIL_0002JD CIL_0002JD_0002 CGP
CIL_00029T CIL_00029T_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 ISS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000339 IEA RNA cap binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005845 ISS mRNA cap binding complex
GO:0005846 IEA nuclear cap binding complex
GO:0005886 IEA plasma membrane
GO:0006370 ISS 7-methylguanosine mRNA capping
GO:0006379 ISS mRNA cleavage
GO:0006406 ISS mRNA export from nucleus
GO:0006446 ISS regulation of translational initiation
GO:0030529 ISS ribonucleoprotein complex
GO:0031047 IEA gene silencing by RNA
GO:0031442 ISS positive regulation of mRNA 3'-end processing
GO:0044822 IEA poly(A) RNA binding
GO:0045292 IEA mRNA cis splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000136937 NCBP1 nuclear cap binding protein subunit 1, 80kDa protein_coding Homo_sapiens

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