ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030014 Ncbp1-001 ENSMUSG00000028330 10090 + 4:46138613-46172403 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000030014
Transcript ID C166 Tie2+ EC mES
ENSMUST00000030014 42.684±3.10 17.796±9.01 7.184±0.93

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 ISS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000339 IEA RNA cap binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005845 ISS mRNA cap binding complex
GO:0005846 IEA nuclear cap binding complex
GO:0005886 IEA plasma membrane
GO:0006370 ISS 7-methylguanosine mRNA capping
GO:0006379 ISS mRNA cleavage
GO:0006406 ISS mRNA export from nucleus
GO:0006446 ISS regulation of translational initiation
GO:0030529 ISS ribonucleoprotein complex
GO:0031047 IEA gene silencing by RNA
GO:0031442 ISS positive regulation of mRNA 3'-end processing
GO:0044822 IEA poly(A) RNA binding
GO:0045292 IEA mRNA cis splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375130 NCBP1-004 protein_coding Homo_sapiens 0 433
ENST00000375147 NCBP1-001 protein_coding Homo_sapiens 0 3090
ENST00000478100 NCBP1-003 nonsense_mediated_decay Homo_sapiens 0 405

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