ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028565 Nfia 10090 + 4:97772734-98118874 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052018 Nfia-004 97777819-98118871 protein_coding
  ENSMUST00000075448 Nfia-001 97777608-98118871 protein_coding
  ENSMUST00000092532 Nfia-201 97777626-98118874 protein_coding
  ENSMUST00000107057 Nfia-002 97777834-98118871 protein_coding
  ENSMUST00000107062 Nfia-003 97777803-98118871 protein_coding
  ENSMUST00000133011 Nfia-006 97911033-98042595 processed_transcript
  ENSMUST00000148930 Nfia-007 97880119-98065355 protein_coding
  ENSMUST00000152023 Nfia-005 97772734-98000466 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000075448ENSMUST00000092532ENSMUST00000107057ENSMUST00000107062ENSMUST00000148930ENSMUST00000152023
Transcript ID C166 Tie2+ EC mES
ENSMUST00000075448 N/A 3.463±1.56 0.740±0.10
ENSMUST00000092532 N/A 1.766±0.00 N/A
ENSMUST00000107057 0.006±0.00 2.714±0.00 N/A
ENSMUST00000107062 N/A 1.700±0.33 0.414±0.00
ENSMUST00000148930 N/A 11.590±0.00 N/A
ENSMUST00000152023 N/A N/A 6.449±1.69

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007OH CIL_0007OH_0002 UCNEbase
CIL_0001NA CIL_0001NA_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006260 IEA DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0014070 IEA response to organic cyclic compound
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062420 nfia protein_coding Danio_rerio
ENSG00000162599 NFIA nuclear factor I/A protein_coding Homo_sapiens

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