ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029207 Apbb2 10090 - 5:66298703-66618784 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087256 Apbb2-201 66301888-66618671 protein_coding
  ENSMUST00000159357 Apbb2-015 66452261-66514837 protein_coding
  ENSMUST00000159512 Apbb2-003 66298728-66618784 protein_coding
  ENSMUST00000159786 Apbb2-007 66298840-66618663 protein_coding
  ENSMUST00000159847 Apbb2-010 66540702-66618688 retained_intron
  ENSMUST00000160063 Apbb2-017 66302205-66492171 nonsense_mediated_decay
  ENSMUST00000160103 Apbb2-011 66452024-66618671 protein_coding
  ENSMUST00000160185 Apbb2-006 66399622-66618683 retained_intron
  ENSMUST00000160775 Apbb2-002 66301872-66337682 processed_transcript
  ENSMUST00000160870 Apbb2-004 66298728-66618681 protein_coding
  ENSMUST00000161716 Apbb2-012 66452267-66546957 protein_coding
  ENSMUST00000161771 Apbb2-018 66307583-66337483 processed_transcript
  ENSMUST00000161879 Apbb2-016 66451995-66514830 protein_coding
  ENSMUST00000161936 Apbb2-013 66461914-66618672 retained_intron
  ENSMUST00000162349 Apbb2-001 66301888-66618671 protein_coding
  ENSMUST00000162366 Apbb2-008 66298725-66618758 protein_coding
  ENSMUST00000162382 Apbb2-014 66451982-66618640 protein_coding
  ENSMUST00000162401 Apbb2-005 66399622-66618670 retained_intron
  ENSMUST00000162955 Apbb2-020 66298703-66313728 retained_intron
  ENSMUST00000162994 Apbb2-009 66452228-66618774 protein_coding
  ENSMUST00000201776 Apbb2-023 66300661-66492172 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000087256ENSMUST00000159512ENSMUST00000160870ENSMUST00000162349ENSMUST00000162366ENSMUST00000201776
Transcript ID C166 Tie2+ EC mES
ENSMUST00000087256 N/A N/A 3.739±0.11
ENSMUST00000159512 3.503±0.00 3.996±0.40 N/A
ENSMUST00000160870 10.523±3.78 17.502±9.43 N/A
ENSMUST00000162349 N/A 7.554±0.38 2.640±0.00
ENSMUST00000162366 N/A N/A 0.880±0.06
ENSMUST00000201776 N/A N/A 1.381±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00038T CIL_00038T_0002 CGP
CIL_00038S CIL_00038S_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IGI neuron migration
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007050 IDA cell cycle arrest
GO:0007411 IGI axon guidance
GO:0008134 IDA transcription factor binding
GO:0030048 NAS actin filament-based movement
GO:0030198 IGI extracellular matrix organization
GO:0030308 IDA negative regulation of cell growth
GO:0035035 NAS histone acetyltransferase binding
GO:0043065 IDA positive regulation of apoptotic process
GO:0043066 IGI negative regulation of apoptotic process
GO:0050821 NAS protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163697 APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 protein_coding Homo_sapiens

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