ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029397 Rchy1 10090 - 5:91948904-91963068 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031345 Rchy1-001 91948904-91963068 protein_coding
  ENSMUST00000138351 Rchy1-003 91951854-91953754 retained_intron
  ENSMUST00000140670 Rchy1-002 91948904-91962556 processed_transcript
  ENSMUST00000169948 Rchy1-004 91949001-91962735 protein_coding
  ENSMUST00000200905 Rchy1-005 91961681-91962726 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031345ENSMUST00000140670ENSMUST00000169948
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031345 18.173±1.71 5.499±2.86 2.589±0.18
ENSMUST00000140670 N/A 2.569±0.00 N/A
ENSMUST00000169948 10.321±1.82 8.799±1.79 3.210±0.44

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006SD CIL_0006SD_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 ISS ubiquitin ligase complex
GO:0002039 IEA p53 binding
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005102 IEA receptor binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031398 ISS positive regulation of protein ubiquitination
GO:0032436 ISS positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0042803 IEA protein homodimerization activity
GO:0051865 ISS protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016710 rchy1 protein_coding Danio_rerio
ENSG00000163743 RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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