ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163743 RCHY1 9606 - 4:75479037-75514764 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324439 RCHY1-001 75479037-75514685 protein_coding
  ENST00000380840 RCHY1-005 75481469-75514286 protein_coding
  ENST00000504085 RCHY1-006 75482342-75514403 nonsense_mediated_decay
  ENST00000505105 RCHY1-003 75482008-75514312 nonsense_mediated_decay
  ENST00000505514 RCHY1-014 75490598-75509807 retained_intron
  ENST00000507014 RCHY1-012 75482538-75514297 protein_coding
  ENST00000512567 RCHY1-008 75482086-75494431 retained_intron
  ENST00000512706 RCHY1-011 75482413-75514430 protein_coding
  ENST00000513083 RCHY1-007 75491607-75514286 retained_intron
  ENST00000513257 RCHY1-004 75482538-75514286 protein_coding
  ENST00000513909 RCHY1-013 75482604-75514256 nonsense_mediated_decay
  ENST00000514021 RCHY1-009 75491911-75514764 processed_transcript
  ENST00000514589 RCHY1-002 75482008-75514418 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000324439ENST00000380840ENST00000505105ENST00000512567ENST00000512706ENST00000513083ENST00000513257ENST00000513909
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000324439 0.312±0.00 2.293±1.53 N/A N/A 2.316±0.99
ENST00000380840 1.649±0.62 N/A N/A N/A 3.248±1.38
ENST00000505105 2.812±0.00 5.060±2.05 8.949±0.00 9.504±0.00 5.737±2.22
ENST00000512567 N/A 2.966±0.00 N/A N/A 5.085±1.66
ENST00000512706 N/A N/A N/A N/A 4.386±2.78
ENST00000513083 N/A N/A N/A N/A 11.651±5.46
ENST00000513257 N/A N/A N/A N/A 6.538±0.00
ENST00000513909 N/A 6.431±0.01 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006SD CIL_0006SD_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0002039 IPI p53 binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005102 IEA receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008270 IEA:IDA zinc ion binding
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0032436 IDA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0042803 IPI protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016710 rchy1 protein_coding Danio_rerio
ENSMUSG00000029397 Rchy1 protein_coding Mus_musculus

Loading