ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029925 Tbxas1 10090 + 6:38875404-39084585 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003017 Tbxas1-001 38918980-39084585 protein_coding
  ENSMUST00000159226 Tbxas1-004 38919005-39029153 retained_intron
  ENSMUST00000160963 Tbxas1-006 38941401-39001363 protein_coding
  ENSMUST00000161360 Tbxas1-005 38983310-39073206 retained_intron
  ENSMUST00000161781 Tbxas1-002 38919024-39084585 retained_intron
  ENSMUST00000162521 Tbxas1-003 38875404-38952973 protein_coding
  ENSMUST00000162656 Tbxas1-007 38971865-38983526 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000003017ENSMUST00000159226ENSMUST00000160963ENSMUST00000161360ENSMUST00000161781ENSMUST00000162521ENSMUST00000162656
Transcript ID C166 Tie2+ EC mES
ENSMUST00000003017 0.107±0.01 0.081±0.04 0.055±0.00
ENSMUST00000159226 0.021±0.00 N/A N/A
ENSMUST00000160963 N/A 1.200±0.00 N/A
ENSMUST00000161360 0.024±0.01 0.066±0.00 0.011±0.00
ENSMUST00000161781 0.012±0.00 0.030±0.01 0.007±0.00
ENSMUST00000162521 0.051±0.03 N/A N/A
ENSMUST00000162656 0.102±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00030C CIL_00030C_0002 CGP
CIL_00023M CIL_00023M_0003 CGP
CIL_000309 CIL_000309_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001516 IEA prostaglandin biosynthetic process
GO:0004497 IEA monooxygenase activity
GO:0004796 IMP thromboxane-A synthase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0030644 IEA cellular chloride ion homeostasis
GO:0045907 IEA positive regulation of vasoconstriction
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002249 tbxas1 protein_coding Danio_rerio
ENSG00000059377 TBXAS1 thromboxane A synthase 1 (platelet) protein_coding Homo_sapiens

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