ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030451 Herc2 10090 + 7:56050155-56231794 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076226 Herc2-201 56050155-56231794 protein_coding
  ENSMUST00000164095 Herc2-202 56050389-56231763 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000076226ENSMUST00000164095
Transcript ID C166 Tie2+ EC mES
ENSMUST00000076226 2.936±0.80 3.441±0.61 1.798±0.97
ENSMUST00000164095 1.656±0.07 0.970±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000391 CIL_000391_0002 CGP
CIL_0006LG CIL_0006LG_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005743 IDA mitochondrial inner membrane
GO:0005856 IEA cytoskeleton
GO:0006281 ISS DNA repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007283 IMP spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0020037 IEA heme binding
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032183 ISS SUMO binding
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073841 herc2 protein_coding Danio_rerio
ENSG00000128731 HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 protein_coding Homo_sapiens

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