ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030779 Rbbp6 10090 + 7:122965686-123002557 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052135 Rbbp6-001 122970564-123002557 protein_coding
  ENSMUST00000071590 Rbbp6-002 122970918-123002557 protein_coding
  ENSMUST00000098062 Rbbp6-005 122970700-122980181 protein_coding
  ENSMUST00000126053 Rbbp6-009 122990130-122992512 retained_intron
  ENSMUST00000137860 Rbbp6-007 122975640-122978761 retained_intron
  ENSMUST00000148880 Rbbp6-006 122965686-122976008 protein_coding
  ENSMUST00000156738 Rbbp6-008 122982542-122985702 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000052135ENSMUST00000071590ENSMUST00000098062
Transcript ID C166 Tie2+ EC mES
ENSMUST00000052135 5.152±1.16 7.742±1.57 10.974±1.21
ENSMUST00000071590 4.962±0.60 6.829±1.68 2.877±0.21
ENSMUST00000098062 N/A 9.772±0.00 3.815±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003VB CIL_0003VB_0003 CGP
CIL_0003V8 CIL_0003V8_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0035264 IMP multicellular organism growth
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0044822 IEA poly(A) RNA binding
GO:0048568 IGI embryonic organ development
GO:0061053 IMP somite development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037919 rbbp6 protein_coding Danio_rerio
ENSDARG00000056907 si:rp71-45g20.10 protein_coding Danio_rerio
ENSDARG00000056917 si:rp71-45g20.4 protein_coding Danio_rerio
ENSDARG00000069804 si:ch211-198k9.6 protein_coding Danio_rerio
ENSDARG00000070812 zgc:174358 protein_coding Danio_rerio
ENSDARG00000077344 si:dkey-27d5.14 protein_coding Danio_rerio
ENSDARG00000077475 zgc:174353 protein_coding Danio_rerio
ENSDARG00000079615 zgc:91850 protein_coding Danio_rerio
ENSDARG00000086077 si:ch211-156l18.4 protein_coding Danio_rerio
ENSDARG00000087708 zgc:174353 protein_coding Danio_rerio
ENSDARG00000088009 si:dkey-27d5.6 protein_coding Danio_rerio
ENSDARG00000088166 zgc:174354 protein_coding Danio_rerio
ENSDARG00000088552 si:dkey-23f9.13 protein_coding Danio_rerio
ENSDARG00000088658 si:ch211-209f22.3 protein_coding Danio_rerio
ENSDARG00000089037 BX908800.1 protein_coding Danio_rerio
ENSDARG00000089182 zgc:91850 protein_coding Danio_rerio
ENSDARG00000090104 zgc:174353 protein_coding Danio_rerio
ENSDARG00000090197 zgc:174355 protein_coding Danio_rerio
ENSDARG00000091883 zgc:77614 protein_coding Danio_rerio
ENSDARG00000092054 zgc:174355 protein_coding Danio_rerio
ENSDARG00000092356 si:dkey-27d5.3 protein_coding Danio_rerio
ENSDARG00000092670 zgc:174461 protein_coding Danio_rerio
ENSDARG00000092675 zgc:77614 protein_coding Danio_rerio
ENSDARG00000092839 si:dkey-23f9.9 protein_coding Danio_rerio
ENSDARG00000093221 zgc:174355 protein_coding Danio_rerio
ENSDARG00000093439 zgc:77614 protein_coding Danio_rerio
ENSDARG00000093481 zgc:77614 protein_coding Danio_rerio
ENSDARG00000093508 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094032 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094113 si:dkey-23f9.6 protein_coding Danio_rerio
ENSDARG00000094152 si:dkey-27d5.5 protein_coding Danio_rerio
ENSDARG00000094196 zgc:174354 protein_coding Danio_rerio
ENSDARG00000094291 si:rp71-45g20.11 protein_coding Danio_rerio
ENSDARG00000094335 si:dkey-23f9.12 protein_coding Danio_rerio
ENSDARG00000094717 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094765 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094884 si:dkey-27d5.9 protein_coding Danio_rerio
ENSDARG00000094940 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094987 si:dkey-27d5.4 protein_coding Danio_rerio
ENSDARG00000095000 zgc:174354 protein_coding Danio_rerio
ENSDARG00000095028 zgc:77614 protein_coding Danio_rerio
ENSDARG00000095285 zgc:77614 protein_coding Danio_rerio
ENSDARG00000095364 si:dkey-23f9.7 protein_coding Danio_rerio
ENSDARG00000095491 zgc:174354 protein_coding Danio_rerio
ENSG00000122257 RBBP6 retinoblastoma binding protein 6 protein_coding Homo_sapiens

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