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ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: retinoblastoma binding protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122257 RBBP6 9606 + 16:24537693-24572863 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319715 RBBP6-001 24540195-24572863 protein_coding
  ENST00000348022 RBBP6-002 24540583-24572863 protein_coding
  ENST00000381039 RBBP6-005 24540520-24572863 protein_coding
  ENST00000452655 RBBP6-003 24540496-24549401 protein_coding
  ENST00000562430 RBBP6-004 24554477-24572860 retained_intron
  ENST00000562683 RBBP6-010 24555830-24559805 protein_coding
  ENST00000564314 RBBP6-006 24537693-24570113 protein_coding
  ENST00000564726 RBBP6-008 24553256-24556333 retained_intron
  ENST00000567686 RBBP6-007 24537712-24561665 protein_coding
  ENST00000568015 RBBP6-009 24539556-24555859 protein_coding
  ENST00000568316 RBBP6-012 24539585-24540284 retained_intron
  ENST00000570185 RBBP6-011 24563280-24567370 retained_intron
  ENST00000613729 RBBP6-013 24552993-24554938 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000319715ENST00000348022ENST00000381039ENST00000562430ENST00000564314ENST00000568316
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000319715 N/A 4.019±1.87 3.066±0.00 4.422±0.00 4.332±2.69
ENST00000348022 N/A 1.159±0.69 N/A N/A 1.971±0.80
ENST00000381039 1.162±0.59 N/A N/A N/A N/A
ENST00000562430 N/A N/A 2.590±0.00 N/A 2.027±1.28
ENST00000564314 N/A N/A N/A N/A 4.617±2.82
ENST00000568316 7.575±0.37 N/A N/A N/A 6.167±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003VB CIL_0003VB_0002 CGP
CIL_0003V8 CIL_0003V8_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0003676 IEA nucleic acid binding
GO:0004842 IDA:IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA:IDA nucleus
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0035264 IEA multicellular organism growth
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0048568 IEA embryonic organ development
GO:0061053 IEA somite development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037919 rbbp6 protein_coding Danio_rerio
ENSDARG00000056907 si:rp71-45g20.10 protein_coding Danio_rerio
ENSDARG00000056917 si:rp71-45g20.4 protein_coding Danio_rerio
ENSDARG00000069804 si:ch211-198k9.6 protein_coding Danio_rerio
ENSDARG00000070812 zgc:174358 protein_coding Danio_rerio
ENSDARG00000077344 si:dkey-27d5.14 protein_coding Danio_rerio
ENSDARG00000077475 zgc:174353 protein_coding Danio_rerio
ENSDARG00000079615 zgc:91850 protein_coding Danio_rerio
ENSDARG00000086077 si:ch211-156l18.4 protein_coding Danio_rerio
ENSDARG00000087708 zgc:174353 protein_coding Danio_rerio
ENSDARG00000088009 si:dkey-27d5.6 protein_coding Danio_rerio
ENSDARG00000088166 zgc:174354 protein_coding Danio_rerio
ENSDARG00000088552 si:dkey-23f9.13 protein_coding Danio_rerio
ENSDARG00000088658 si:ch211-209f22.3 protein_coding Danio_rerio
ENSDARG00000089037 BX908800.1 protein_coding Danio_rerio
ENSDARG00000089182 zgc:91850 protein_coding Danio_rerio
ENSDARG00000090104 zgc:174353 protein_coding Danio_rerio
ENSDARG00000090197 zgc:174355 protein_coding Danio_rerio
ENSDARG00000091883 zgc:77614 protein_coding Danio_rerio
ENSDARG00000092054 zgc:174355 protein_coding Danio_rerio
ENSDARG00000092356 si:dkey-27d5.3 protein_coding Danio_rerio
ENSDARG00000092670 zgc:174461 protein_coding Danio_rerio
ENSDARG00000092675 zgc:77614 protein_coding Danio_rerio
ENSDARG00000092839 si:dkey-23f9.9 protein_coding Danio_rerio
ENSDARG00000093221 zgc:174355 protein_coding Danio_rerio
ENSDARG00000093439 zgc:77614 protein_coding Danio_rerio
ENSDARG00000093481 zgc:77614 protein_coding Danio_rerio
ENSDARG00000093508 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094032 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094113 si:dkey-23f9.6 protein_coding Danio_rerio
ENSDARG00000094152 si:dkey-27d5.5 protein_coding Danio_rerio
ENSDARG00000094196 zgc:174354 protein_coding Danio_rerio
ENSDARG00000094291 si:rp71-45g20.11 protein_coding Danio_rerio
ENSDARG00000094335 si:dkey-23f9.12 protein_coding Danio_rerio
ENSDARG00000094717 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094765 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094884 si:dkey-27d5.9 protein_coding Danio_rerio
ENSDARG00000094940 zgc:77614 protein_coding Danio_rerio
ENSDARG00000094987 si:dkey-27d5.4 protein_coding Danio_rerio
ENSDARG00000095000 zgc:174354 protein_coding Danio_rerio
ENSDARG00000095028 zgc:77614 protein_coding Danio_rerio
ENSDARG00000095285 zgc:77614 protein_coding Danio_rerio
ENSDARG00000095364 si:dkey-23f9.7 protein_coding Danio_rerio
ENSDARG00000095491 zgc:174354 protein_coding Danio_rerio
ENSMUSG00000030779 Rbbp6 protein_coding Mus_musculus

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