ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030921 Trim30a 10090 - 7:104409025-104465193 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076922 Trim30a-001 104409025-104465193 protein_coding
  ENSMUST00000125762 Trim30a-002 104411370-104416928 processed_transcript
  ENSMUST00000142124 Trim30a-004 104411685-104412267 retained_intron
  ENSMUST00000152397 Trim30a-003 104411345-104412623 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000076922ENSMUST00000125762
Transcript ID C166 Tie2+ EC mES
ENSMUST00000076922 0.017±0.01 4.063±4.42 0.170±0.01
ENSMUST00000125762 0.042±0.00 N/A N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0032715 IMP negative regulation of interleukin-6 production
GO:0032720 IMP negative regulation of tumor necrosis factor production
GO:0034122 IMP negative regulation of toll-like receptor signaling pathway
GO:0045732 IMP positive regulation of protein catabolic process
GO:0046598 IDA positive regulation of viral entry into host cell
GO:0051865 IMP protein autoubiquitination
GO:1900226 IMP negative regulation of NLRP3 inflammasome complex assembly
GO:2000378 IMP negative regulation of reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132256 TRIM5 tripartite motif containing 5 protein_coding Homo_sapiens

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