ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032469 Dbr1 10090 + 9:99575799-99584501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066650 Dbr1-001 99575799-99584501 protein_coding
  ENSMUST00000136884 Dbr1-006 99580297-99582689 protein_coding
  ENSMUST00000138002 Dbr1-004 99576108-99582058 protein_coding
  ENSMUST00000139796 Dbr1-005 99580202-99583838 nonsense_mediated_decay
  ENSMUST00000148987 Dbr1-002 99575828-99582441 protein_coding
  ENSMUST00000156035 Dbr1-003 99576080-99582049 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000066650
Transcript ID C166 Tie2+ EC mES
ENSMUST00000066650 9.015±0.77 1.663±0.32 3.649±0.61

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007YL CIL_0007YL_0002 VISTA

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000375 ISS RNA splicing, via transesterification reactions
GO:0000398 IDA mRNA splicing, via spliceosome
GO:0005634 ISS nucleus
GO:0008419 ISS RNA lariat debranching enzyme activity
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056923 dbr1 protein_coding Danio_rerio
ENSG00000138231 DBR1 debranching RNA lariats 1 protein_coding Homo_sapiens

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