ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: debranching RNA lariats 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138231 DBR1 9606 - 3:138161012-138174949 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260803 DBR1-001 138161012-138174949 protein_coding
  ENST00000460271 DBR1-003 138163349-138164203 retained_intron
  ENST00000463982 DBR1-002 138171320-138174866 processed_transcript
  ENST00000477557 DBR1-004 138163349-138174859 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000260803ENST00000463982
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000260803 0.744±0.00 4.195±0.83 6.339±0.00 3.600±1.78
ENST00000463982 1.506±0.07 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007YL CIL_0007YL_0001 VISTA
CIL_00036L CIL_00036L_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000375 IMP RNA splicing, via transesterification reactions
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0008152 IEA metabolic process
GO:0008419 IMP RNA lariat debranching enzyme activity
GO:0016787 IEA hydrolase activity
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0090502 IMP RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056923 dbr1 protein_coding Danio_rerio
ENSMUSG00000032469 Dbr1 protein_coding Mus_musculus

Loading