ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032558 Nphp3 10090 + 9:104002544-104153483 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035167 Nphp3-001 104002546-104043818 protein_coding
  ENSMUST00000129819 Nphp3-008 104002654-104153483 nonsense_mediated_decay
  ENSMUST00000191919 Nphp3-004 104002758-104016686 retained_intron
  ENSMUST00000192485 Nphp3-006 104031860-104034422 retained_intron
  ENSMUST00000193439 Nphp3-005 104002767-104042344 nonsense_mediated_decay
  ENSMUST00000193642 Nphp3-003 104002544-104039707 retained_intron
  ENSMUST00000194183 Nphp3-007 104035848-104038512 protein_coding
  ENSMUST00000194774 Nphp3-002 104002654-104043109 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166mESENSMUST00000035167
Transcript ID C166 mES
ENSMUST00000035167 6.389±0.95 4.367±0.38

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005929 ISS cilium
GO:0006629 IMP lipid metabolic process
GO:0007163 IMP establishment or maintenance of cell polarity
GO:0007368 IMP determination of left/right symmetry
GO:0016055 IEA Wnt signaling pathway
GO:0030198 IMP extracellular matrix organization
GO:0030814 IMP regulation of cAMP metabolic process
GO:0048496 IMP maintenance of organ identity
GO:0060271 ISS cilium morphogenesis
GO:0060993 IMP kidney morphogenesis
GO:0072372 ISS primary cilium
GO:0090090 ISS negative regulation of canonical Wnt signaling pathway
GO:0097543 IDA ciliary inversin compartment
GO:0097546 IDA ciliary base
GO:2000095 ISS regulation of Wnt signaling pathway, planar cell polarity pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078261 nphp3 protein_coding Danio_rerio
ENSG00000113971 NPHP3 nephronophthisis 3 (adolescent) protein_coding Homo_sapiens
ENSG00000274810 NPHP3-ACAD11 NPHP3-ACAD11 readthrough (NMD candidate) protein_coding Homo_sapiens

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