ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035167 Nphp3-001 ENSMUSG00000032558 10090 + 9:104002546-104043818 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166mESENSMUST00000035167
Transcript ID C166 mES
ENSMUST00000035167 6.389±0.95 4.367±0.38

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005929 ISS cilium
GO:0006629 IMP lipid metabolic process
GO:0007163 IMP establishment or maintenance of cell polarity
GO:0007368 IMP determination of left/right symmetry
GO:0016055 IEA Wnt signaling pathway
GO:0030198 IMP extracellular matrix organization
GO:0030814 IMP regulation of cAMP metabolic process
GO:0048496 IMP maintenance of organ identity
GO:0060271 ISS cilium morphogenesis
GO:0060993 IMP kidney morphogenesis
GO:0072372 ISS primary cilium
GO:0090090 ISS negative regulation of canonical Wnt signaling pathway
GO:0097543 IDA ciliary inversin compartment
GO:0097546 IDA ciliary base
GO:2000095 ISS regulation of Wnt signaling pathway, planar cell polarity pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337331 NPHP3-006 protein_coding Homo_sapiens 0 3976
ENST00000383282 NPHP3-201 protein_coding Homo_sapiens 0 464
ENST00000465756 NPHP3-002 nonsense_mediated_decay Homo_sapiens 0 1696
ENST00000469232 NPHP3-003 nonsense_mediated_decay Homo_sapiens 0 1146
ENST00000471145 NPHP3-008 processed_transcript Homo_sapiens 0 368
ENST00000471702 NPHP3-ACAD11-001 nonsense_mediated_decay Homo_sapiens 0 2069
ENST00000474871 NPHP3-005 retained_intron Homo_sapiens 0 937
ENST00000476742 NPHP3-009 processed_transcript Homo_sapiens 0 623
ENST00000490993 NPHP3-004 retained_intron Homo_sapiens 0 1646
ENST00000493732 NPHP3-007 retained_intron Homo_sapiens 0 538

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