ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033009 Ogfod1 10090 + 8:94037198-94067921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060632 Ogfod1-004 94037291-94067921 protein_coding
  ENSMUST00000093301 Ogfod1-002 94037238-94067921 protein_coding
  ENSMUST00000109556 Ogfod1-001 94037198-94067921 protein_coding
  ENSMUST00000127634 Ogfod1-005 94037263-94057779 processed_transcript
  ENSMUST00000141636 Ogfod1-003 94037260-94039452 retained_intron
  ENSMUST00000145717 Ogfod1-006 94055059-94057780 retained_intron
  ENSMUST00000172674 Ogfod1-007 94037296-94056111 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000060632ENSMUST00000109556
Transcript ID C166 Tie2+ EC mES
ENSMUST00000060632 N/A 0.889±0.00 N/A
ENSMUST00000109556 8.469±0.38 2.024±0.01 0.917±0.13

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00048W CIL_00048W_0002 CGP
CIL_00048V CIL_00048V_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006449 ISS regulation of translational termination
GO:0008283 ISS cell proliferation
GO:0010494 ISS cytoplasmic stress granule
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0018126 ISS protein hydroxylation
GO:0019511 IEA peptidyl-proline hydroxylation
GO:0031418 IEA L-ascorbic acid binding
GO:0031543 ISS peptidyl-proline dioxygenase activity
GO:0031544 ISS peptidyl-proline 3-dioxygenase activity
GO:0034063 ISS stress granule assembly
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036061 ogfod1 protein_coding Danio_rerio
ENSG00000087263 OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein_coding Homo_sapiens

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